为了方便更多用户使用,我们邀请悟空云平台开发者诗盛定期(基本上每月一期)以视频讲解的方式给大家介绍悟空云平台的使用,本期给大家带来第十一期的介绍内容---“热图与富集结果关联图”。该图可将蛋白质表达数据和富集分析结果数据关联在一起,并进行可视化。针对该图,我们也额外开发了一个小工具,后续应该会在相应期刊上发表出来,届时也希望大家多多引用(往期视频可见公众号菜单-技术动态-悟空云系列讲座)。


视频内容请通过页面中的“核对公众号原文”观看。

目前基于悟空平台开发的分析工具已发表以下文章:


NAguideR模块:
(2020) Shisheng Wang , Wenxue Li, Liqiang Hu, Jingqiu Cheng, Hao Yang, Yansheng Liu, NAguideR: performing and prioritizing missing value imputations for consistent bottom-up proteomic analyses, Nucleic Acids Research, gkaa498. (IF: 11). 

motifeR模块:
(2019) Shisheng Wang , Yue Cai, Jingqiu Cheng, Wenxue Li, Yansheng Liu and Hao Yang. motifeR: An Integrated Web Software for Identification and Visualization of Protein Post‐Translational Modification Motifs. Proteomics: 201900245. (IF: 3). 

pseudoQC模块:
(2019) Shisheng Wang and Hao Yang. pseudoQC: A Regression‐Based Simulation Software for Correction and Normalization of Complex Metabolomics and Proteomics Datasets. Proteomics: 1900264. (IF: 3). 

MetaboGroupS模块:
(2018) Shisheng Wang , ..., and Meng Gong. MetaboGroupS: A Group Entropy-Based Web Platform for Evaluating Normalization Methods in Blood Metabolomics Data from Maintenance Hemodialysis Patients. Anal Chem 90, 11124-11130. (IF: 6). 

MixProTool模块:
(2018) Shisheng Wang , ..., and Hao Yang. MixProTool: A Powerful and Comprehensive Web Tool for Analyzing and Visualizing Multigroup Proteomics Data. Journal of computational biology : a journal of computational molecular cell biology 25, 1123-1127. (IF: 1). 
同时悟空平台整合上百个分析模块,包括且远不止以下功能

而围绕上游质谱数据解析和下游组学应用,易算近期也发表了多篇文章:

Mesoporous Silica as Sorbents and Enzymatic Nanoreactors for Microbial Membrane Proteomics

 J. Zhao, R. Jian, Y. Wang, B. Yang, D. Zhao, C. Shen, L. Qiao*, B. Liu*ACS Applied Materials & Interfaces, IF9,2021

Direct MALDI-TOF Profiling of Gingival Crevicular Fluid Sediments for Periodontitis Diagnosis

J. Yi, Y. Shen, Y. Yang, C. Shen, B. Liu, L. Qiao*, Y. Wang*Talanta, IF5,2021

Proteomic and Metabolic Elucidation of Solar-Powered Biomanufacturing by Bio-Abiotic Hybrid System. 

Rutan Zhang, ..., Chengpin Shen, ..., Liang Qiao  Chem IF18,2020

In silico spectral libraries by deep learning facilitate data-independent acquisition proteomics.

Yi Yang, ...,Chengpin Shen,... and Liang Qiao  Nature Communications IF13,2020


Metaproteomics characterizes human gut microbiome function in colorectal cancer.


Shuping Long, ..., Chengpin Shen,.. and Liang Qiao npj Biofilms and Microbiomes IF5,2020



如有您进一步咨询需求和合作意向。

欢迎和我们联系

www.omicsolution.com

若有任何疑问,欢迎邮件或来电咨询:

marketing@omicsolution.com

support@omicsolution.com

+86-18221381405